OntologyTerm
Summary of SMaHT Portal object type OntologyTerm . Types referencing this type are: Tissue, Treatment. Property names in red are required properties; those in blue are identifying properties; and properties with types in green are reference properties.Tip
See actual OntologyTerm data hereRequired Properties
| Property | Type | Description |
|---|---|---|
| identifier | string | See below for more details. |
| ontologies | Ontology array of string | See below for more details. |
| title | string | See below for more details. |
| At least one of the following ... | ||
| consortia | Consortium array of string | See below for more details. See values here |
| submission_centers | SubmissionCenter array of string | See below for more details. See values here |
Identifying Properties
| Property | Type | Description |
|---|---|---|
| aliases | array of string | See below for more details. |
| identifier | string | See below for more details. |
| uuid | string | See below for more details. |
Reference Properties
| Property | Type | Description |
|---|---|---|
| consortia | Consortium array of string | See below for more details. See values here |
| grouping_term | OntologyTerm string | See below for more details. |
| ontologies | Ontology array of string | See below for more details. |
| submission_centers | SubmissionCenter array of string | See below for more details. See values here |
Properties
| Property | Type | Description |
|---|---|---|
| aliases | array of string • unique • restricted | Institution-specific ID (e.g. bgm:cohort-1234-a). Must adhere to (regex) pattern: ^[^\s\\\/]+:[^\s\\\/]+$ |
| consortia | Consortium • array of string • unique | Consortia associated with this item. See values here |
| description | string | Description of the ontology term. |
| display_title | string • calculated | A calculated title for every object. |
| grouping_term | OntologyTerm • string | Ontology term that this term is grouped under - less specific term used in search. |
| identifier | string • min length: 2 • unique | Unique, identifying name for the item. Must adhere to (regex) pattern: ^[A-Z]+:[0-9]+$ |
| ontologies | Ontology • array of string | Ontologies that this term is a part of. |
| preferred_name | string | A preferred name (possibly shortened or simpler version) for the ontology term - can be used for submission or retrieval. |
| status • current • deleted • obsolete • released ← default | enum of string • default: released | - |
| submission_centers | SubmissionCenter • array of string • unique | Submission Centers that created this item. See values here |
| tags | array of string • min string length: 1 • max string length: 50 • unique • restricted | Key words that can tag an item - useful for filtering. Must adhere to (regex) pattern: ^[a-zA-Z0-9|_-]+$ |
| title | string • min length: 3 | Title of the ontology term. |
| url | string • format: uri | The url that uniquely identifies term - often purl. |
| uuid | string | Unique ID by which this object is identified. |