Type Hierarchy

Below is a depiction of the parent/child relationship hierarchy of the types supported by SMaHT Portal. Items suffixed with (A) are abstract types which may not be directly created.

    └─ Types
       ├── Analyte
       ├── Assay
       ├── CellLine
       ├── Consortium
       ├── DeathCircumstances
       ├── Demographic
       ├── Diagnosis
       ├── Document
       ├── Donor
       ├── Exposure
       ├── FamilyHistory
       ├── File (A)
       │   ├── OutputFile
       │   ├── ReferenceFile
       │   └── SubmittedFile (A)
       │       ├── AlignedReads
       │       ├── HistologyImage
       │       ├── SupplementaryFile
       │       ├── UnalignedReads
       │       └── VariantCalls
       ├── FileFormat
       ├── FileSet
       ├── FilterSet
       ├── Image
       ├── Library
       ├── MedicalHistory
       ├── MedicalTreatment
       ├── Ontology
       ├── OntologyTerm
       ├── PathologyReport (A)
       │   ├── BrainPathologyReport
       │   └── NonBrainPathologyReport
       ├── Preparation (A)
       │   ├── AnalytePreparation
       │   └── LibraryPreparation
       ├── PreparationKit
       ├── Protocol
       ├── QualityMetric
       │   └── ExternalQualityMetric
       ├── ReferenceGenome
       │   └── DonorSpecificAssembly
       ├── Sample (A)
       │   ├── CellCultureSample
       │   ├── CellSample
       │   └── TissueSample
       ├── SampleSource (A)
       │   ├── CellCulture
       │   │   └── CellCultureMixture
       │   └── Tissue
       ├── Sequencer
       ├── Sequencing
       ├── Software
       ├── SubmissionCenter
       ├── TissueCollection
       ├── Treatment
       └── User