Treatment
Summary of SMaHT Portal object type Treatment . Types referencing this type are: AnalytePreparation, LibraryPreparation, Preparation. Property names in red are required properties; those in blue are identifying properties; and properties with types in green are reference properties.Description: An experimental treatment applied during analyte preparation or library preparation.
Tip
See actual Treatment data hereRequired Properties
| Property | Type | Description |
|---|---|---|
| agent | OntologyTerm string | See below for more details. |
| submission_centers | SubmissionCenter array of string | See below for more details. See values here |
| submitted_id | string | See below for more details. |
Identifying Properties
| Property | Type | Description |
|---|---|---|
| accession | string | See below for more details. |
| submitted_id | string | See below for more details. |
| uuid | string | See below for more details. |
Reference Properties
| Property | Type | Description |
|---|---|---|
| agent | OntologyTerm string | See below for more details. |
| consortia | Consortium array of string | See below for more details. See values here |
| submission_centers | SubmissionCenter array of string | See below for more details. See values here |
Properties
| Property | Type | Description |
|---|---|---|
| accession | string | A unique identifier to be used to reference the object. [Only admins are allowed to set or update this value.] |
| agent | OntologyTerm • string | Agent in the treatment. |
| alternate_accessions | array of string • restricted | Accessions previously assigned to objects that have been merged with this object. [Only admins are allowed to set or update this value.] |
| concentration | number • min value: 0 | Concentration of the treatment. |
| concentration_units • mg/mL | enum of string | Units for the concentration of the treatment. |
| consortia | Consortium • array of string • unique | Consortia associated with this item. See values here |
| display_title | string • calculated | - |
| duration | number • min value: 0 | Duration of the treatment (minutes). |
| status • deleted • draft • in review ← default • obsolete • public • released • restricted | enum of string • default: in review | - |
| submission_centers | SubmissionCenter • array of string • unique | Submission Centers that created this item. See values here |
| submitted_id | string | Unique identifier for the item assigned by the submitter. Must adhere to (regex) pattern: ^[A-Z0-9]{3,}_TREATMENT_[A-Z0-9-_.]{4,}$ |
| tags | array of string • min string length: 1 • max string length: 50 • unique • restricted | Key words that can tag an item - useful for filtering. Must adhere to (regex) pattern: ^[a-zA-Z0-9|_-]+$ |
| temperature | number | Temperature of the treatment (Celsius). |
| uuid | string | Unique ID by which this object is identified. |